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pymzML 2.5.3 documentation
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Welcome to pymzML’s documentation!
Welcome to pymzML’s documentation!
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Contents
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1. Introduction
1.1. General information
1.2. Summary
1.3. Implementation
1.4. Download
1.5. Citation
1.6. Installation
1.7. Contributing
1.8. Code of Conduct
2. Quick Start
2.1. Parsing a mzML file and setting measured precision
2.2. Seeking in a mzML file
2.3. Reading mzML indices with a custom regular expression
3. pymzML module content
3.1. Main reader interface
3.2. Spectrum and Chromatogram
3.3. Utils
3.4. Plotting functions
3.5. File Access
3.6. OBO parser
3.7. Regex patterns
4. Examples and Advanced Usage
4.1. Writing and Reading igzip files
4.2. Generalized Seekable index Gzip Writer
4.3. Generalized Seekable index Gzip Reader
4.4. Practical Example: Moby Dick
4.5. igzip file format specification
4.6. Implementing an own file class
4.7. Example Scripts
5. Supplemental Material
5.1. Benchmark Files
Indices and tables
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Index
Module Index
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Welcome to pymzML’s documentation!